Thread 'Docking failure'

Thread 'Docking failure'

Message boards : Questions and problems : Docking failure
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Author	Message
Carl Send message Joined: 11 Aug 13 Posts: 2	Message 50173 - Posted: 11 Aug 2013, 1:43:48 UTC Looks as though there are Docking server problem. Uploads fails. 8/10/2013 5:29:25 PM \| Docking \| Backing off 3 min 54 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61266_421360_0_2 8/10/2013 5:45:53 PM \| Docking \| Computation for task 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0 finished 8/10/2013 5:45:53 PM \| Docking \| Starting task 1ohr1hsg_mod0014crossdockinghiv1_61277_411414_0 using charmm34 version 623 in slot 4 8/10/2013 5:45:55 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_0 8/10/2013 5:45:55 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_1 8/10/2013 5:45:56 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 5:45:56 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 5:45:56 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_0: transient upload error 8/10/2013 5:45:56 PM \| Docking \| Backing off 3 min 14 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_0 8/10/2013 5:45:56 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_1: transient upload error 8/10/2013 5:45:56 PM \| Docking \| Backing off 3 min 50 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_1 8/10/2013 5:45:56 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_2 8/10/2013 5:45:56 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_3 8/10/2013 5:45:57 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 5:45:57 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_3: transient upload error 8/10/2013 5:45:57 PM \| Docking \| Backing off 2 min 23 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_3 8/10/2013 5:45:58 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 5:45:58 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_2: transient upload error 8/10/2013 5:45:58 PM \| Docking \| Backing off 3 min 52 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61270_432025_0_2 8/10/2013 5:49:13 PM \| \| Resuming GPU computation 8/10/2013 6:02:14 PM \| Docking \| Computation for task 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0 finished 8/10/2013 6:02:14 PM \| Docking \| Starting task 1ohr1hsg_mod0014crossdockinghiv1_61271_36760_0 using charmm34 version 623 in slot 2 8/10/2013 6:02:16 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_0 8/10/2013 6:02:16 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_1 8/10/2013 6:02:18 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 6:02:18 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 6:02:18 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_0: transient upload error 8/10/2013 6:02:18 PM \| Docking \| Backing off 3 min 17 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_0 8/10/2013 6:02:18 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_1: transient upload error 8/10/2013 6:02:18 PM \| Docking \| Backing off 2 min 44 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_1 8/10/2013 6:02:18 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_2 8/10/2013 6:02:18 PM \| Docking \| Started upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_3 8/10/2013 6:02:19 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 6:02:19 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_3: transient upload error 8/10/2013 6:02:19 PM \| Docking \| Backing off 3 min 28 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_3 8/10/2013 6:02:20 PM \| Docking \| [error] Error reported by file upload server: can't open log file 8/10/2013 6:02:20 PM \| Docking \| Temporarily failed upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_2: transient upload error 8/10/2013 6:02:20 PM \| Docking \| Backing off 3 min 52 sec on upload of 1ohr1hsg_mod0014crossdockinghiv1_61268_132395_0_2 ID: 50173 ·

Jord Volunteer tester Help desk expert Send message Joined: 29 Aug 05 Posts: 15640	Message 50174 - Posted: 11 Aug 2013, 3:15:04 UTC - in response to Message 50173. I was about to tell you to go to the Docking web site then, and report it there (since it isn't something BOINC can do something about), but seeing all the MySQL warnings on http://docking.cis.udel.edu/, they seem to have a major breakdown. Warning: session_start() [function.session-start]: open(/var/lib/php/session/sess_vesnd14t3e887ee7sj4pk7epm6, O_RDWR) failed: Read-only file system (30) in /boinc/projects/docking/html_v2/project/project.inc on line 32 Warning: mysql_pconnect() [function.mysql-pconnect]: Can't connect to local MySQL server through socket '/var/lib/mysql/mysql.sock' (111) in /boinc/projects/docking/html_v2/inc/db.inc on line 23 Unable to connect to database - please try again later Error: 2002Can't connect to local MySQL server through socket '/var/lib/mysql/mysql.sock' (111) Warning: Unknown: open(/var/lib/php/session/sess_vesnd14t3e887ee7sj4pk7epm6, O_RDWR) failed: Read-only file system (30) in Unknown on line 0 Warning: Unknown: Failed to write session data (files). Please verify that the current setting of session.save_path is correct (/var/lib/php/session) in Unknown on line 0 ID: 50174 ·

Message boards : Questions and problems : Docking failure

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